BLASTP 2.7.1+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: GCF_000001405.40_GRCh38.p14_protein.faa 136,193 sequences; 94,334,868 total letters Query= WP_193092964.1 Length=1906 Score E Sequences producing significant alignments: (Bits) Value XP_016856417.1 collagen alpha-1(XXIV) chain isoform X8 [Homo sa... 52.8 2e-05 XP_016856418.1 collagen alpha-1(XXIV) chain isoform X9 [Homo sa... 49.3 2e-04 XP_016856414.1 collagen alpha-1(XXIV) chain isoform X1 [Homo sa... 47.8 6e-04 XP_016856413.1 collagen alpha-1(XXIV) chain isoform X1 [Homo sa... 47.8 6e-04 XP_016856415.1 collagen alpha-1(XXIV) chain isoform X2 [Homo sa... 47.4 7e-04 XP_047272961.1 collagen alpha-1(XXIV) chain isoform X3 [Homo sa... 46.6 0.001 XP_047272960.1 collagen alpha-1(XXIV) chain isoform X3 [Homo sa... 46.6 0.001 XP_047272957.1 collagen alpha-1(XXIV) chain isoform X3 [Homo sa... 46.6 0.001 NP_690850.2 collagen alpha-1(XXIV) chain isoform 1 precursor [H... 46.6 0.001 NP_001336884.1 collagen alpha-1(XXIV) chain isoform 2 [Homo sap... 45.8 0.002 XP_047272978.1 collagen alpha-1(XXIV) chain isoform X7 [Homo sa... 44.3 0.007 XP_016856416.1 collagen alpha-1(XXIV) chain isoform X4 [Homo sa... 43.9 0.009 XP_047272972.1 collagen alpha-1(XXIV) chain isoform X6 [Homo sa... 43.5 0.012 XP_047272971.1 collagen alpha-1(XXIV) chain isoform X5 [Homo sa... 43.1 0.018 > XP_016856417.1 collagen alpha-1(XXIV) chain isoform X8 [Homo sapiens] Length=972 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 276/854 (32%), Positives = 307/854 (36%), Gaps = 171/854 (20%) Query 824 NAGNGGDGGVGG-NGGNGADNTTTAAAGTGTGGQQGNGGNGGNGGTGG-KGGTGGDGALA 881 + G GD G+ G NG G ++G GN G G G KG G +G + Sbjct 12 SLGFPGDIGIPGQNGPEGPKELVILWKHEPFISEKGLLGNRGPPGPPGLKGTQGEEGPI- 70 Query 882 GSSGGAGGKGGNGGDAGKAGTGSAPGTAGTGGDGGKGGNGGIGAAGTTGPVGT-GASGGT 940 GA G+ G G G+ G PG G G+ G GN IG G TGPVG G G T Sbjct 71 ----GAFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGN--IGKIGETGPVGLPGEVGMT 124 Query 941 GGSGGAGGTGGDGGAANGGTAGAGGAGGNGGKGGDGGAGVTSSTAGNSGGAGGSGGKGGD 1000 G G G G G G G G G G G G G G G G KG Sbjct 125 GSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQ- 183 Query 1001 AGAGGAGATPGANGIAGNGGDGGDGAAGAVGISGATGA-GD----GGHGGTGGAGGNGGT 1055 G G DG G GI GA G GD G HG G G G Sbjct 184 -----------------RGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGER 226 Query 1056 GGAGGSGIDGVGGGTGGTGGNGGNGAIGGAGGDAGGSGNSGGNG--GTGGKGGNAGAGGA 1113 G G G+ G+ G TG G G G + G GD G G G G GT G+ G G GA Sbjct 227 GFQGKPGLQGLPGSTGDRGLPGEPG-LRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGA 285 Query 1114 AGSNGGTVGANGTGGDGGNGSAAGAATAGSNGGAGTGSAGGNGGTGGRGGSGGAGGDGIG 1173 G G TAGS GG TG G G G G G G DG+ Sbjct 286 KGDVG---------------------TAGSVGG--TGEPGLRGEPGAPGEEGLQGKDGLK 322 Query 1174 GVGGGKGGNGADGEVGGAGGAGGSGPNTSPGGNGGQGGQGGSGGAGGAAGAGGAGGGANG 1233 GV GG+G G DGE G G G GP G+ GQ G G G G G G G Sbjct 323 GVPGGRGLPGEDGEKGEMGLPGIIGP-------LGRSGQTGLPGPEGIVGIPGQRGRP-G 374 Query 1234 TAGNGGQGGA-GGTGGAGAASSATNGGSGGAGGTGGA-GGTGGAGGDGVGGAGGGNGGHG 1291 G+ GQ G G G G G GA GT GA G G G DG G G G H Sbjct 375 KKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRG-HQ 433 Query 1292 GDAGDGGNGANGNNRSSGSFLAAGGTGGAAGDGGQGGQ----------GGAGGGAGGQGG 1341 G G G G G+ G G+ G G G QG Sbjct 434 GQPG------------------PSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGE 475 Query 1342 AGGAGGTGGNGGNITGGTAGTAGAAGNGGAAGKGGAGGQGGTGGGTGGQGGAGGDGGAGG 1401 G G G G G G GA G G G+ G G+ G G G +G G G G Sbjct 476 RGEPGAEGYKGH---VGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGP 532 Query 1402 TGGDRTVGGGTVPAGSGGQGGNAGGGGAGGQGGADGGSGGDGGDAGTGGNGGNGGNRNSG 1461 +G G G G G G G GADG SG + G G G G G R Sbjct 533 SGK----------PGIPGLQGLLGPKGIQGYHGADGISG-NPGKIGPPGKQGLPGIR--- 578 Query 1462 NGTGGAGGNG-GGANGGAGSAGGSGGGTGGNGGAGGDAGDAGNGGNGNGTGNGGNGGNGG 1520 GG G G GA G G G SG G+ G G G+ G G G Sbjct 579 ---GGPGRTGLAGAPGPPGVKGSSG--LPGSPGIQGPKGEQGLPGQP------------G 621 Query 1521 IAGMGGNGGAGTGSGNGGNGGSGGNGGNAGMGGNSGTGSGDGGAGGNGGAAGTGGTGGDG 1580 I G G+ GA G G G+ G+ G G G G G G G G GD Sbjct 622 IQGKRGHRGAQ---------GDQGPCGDPGLKGQPGE-YGVQGLTGFQGFPGPKGPEGDA 671 Query 1581 GLTGT----GGTGGSGGTGGDGGNGGNGADNTANMTAQAGGDGGNGGDGGFGGGAGAGGG 1636 G+ G G G G TG G G G G G G+ GF G Sbjct 672 GIVGISGPKGPIGHRGNTGPLGREGIIGP----------TGRTGPRGEKGFRGE------ 715 Query 1637 GLTAGANGTGGQGG 1650 TG QG Sbjct 716 --------TGPQGP 721 > XP_016856418.1 collagen alpha-1(XXIV) chain isoform X9 [Homo sapiens] Length=957 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 262/805 (33%), Positives = 289/805 (36%), Gaps = 169/805 (21%) Query 871 KGGTGGDGALAGSSGGAGGKGGNGGDAGKAGTGSAPGTAGTGGDGGKGGNGGIGAAGTTG 930 KG G +G + GA G+ G G G+ G PG G G+ G GN IG G TG Sbjct 46 KGTQGEEGPI-----GAFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGN--IGKIGETG 98 Query 931 PVGT-GASGGTGGSGGAGGTGGDGGAANGGTAGAGGAGGNGGKGGDGGAGVTSSTAGNSG 989 PVG G G TG G G G G G G G G G G G G G Sbjct 99 PVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARG 158 Query 990 GAGGSGGKGGDAGAGGAGATPGANGIAGNGGDGGDGAAGAVGISGATGA-GD----GGHG 1044 G G KG G G DG G GI GA G GD G HG Sbjct 159 PPGSQGPKGQ------------------RGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHG 200 Query 1045 GTGGAGGNGGTGGAGGSGIDGVGGGTGGTGGNGGNGAIGGAGGDAGGSGNSGGNG--GTG 1102 G G G G G G+ G+ G TG G G G + G GD G G G G GT Sbjct 201 LIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPG-LRGLQGDVGPPGEMGMEGPPGTE 259 Query 1103 GKGGNAGAGGAAGSNGGTVGANGTGGDGGNGSAAGAATAGSNGGAGTGSAGGNGGTGGRG 1162 G+ G G GA G G TAGS GG TG G G G G Sbjct 260 GESGLQGEPGAKGDVG---------------------TAGSVGG--TGEPGLRGEPGAPG 296 Query 1163 GSGGAGGDGIGGVGGGKGGNGADGEVGGAGGAGGSGPNTSPGGNGGQGGQGGSGGAGGAA 1222 G G DG+ GV GG+G G DGE G G G GP G+ GQ G G G Sbjct 297 EEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPL-------GRSGQTGLPGPEGIV 349 Query 1223 GAGGAGGGANGTAGNGGQGGA-GGTGGAGAASSATNGGSGGAGGTGGA-GGTGGAGGDGV 1280 G G G G G+ GQ G G G G G GA GT GA G G G DG Sbjct 350 GIPGQRGRP-GKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGE 408 Query 1281 GGAGGGNGGHGGDAGDGGNGANGNNRSSGSFLAAGGTGGAAGDGGQGGQ----------G 1330 G G G H G G G G G+ G G+ Sbjct 409 PGIPGYRG-HQGQPG------------------PSGLPGPKGEKGYPGEDSTVLGPPGPR 449 Query 1331 GAGGGAGGQGGAGGAGGTGGNGGNITGGTAGTAGAAGNGGAAGKGGAGGQGGTGGGTGGQ 1390 G G G QG G G G G G G GA G G G+ G G+ G G G + Sbjct 450 GEPGPVGDQGERGEPGAEGYKGHV---GVPGLRGATGQQGPPGEPGDQGEQGLKGERGSE 506 Query 1391 GGAGGDGGAGGTGGDRTVGGGTVPAGSGGQGGNAGGGGAGGQGGADGGSGGDGGDAGTGG 1450 G G G G +G G G G G G G GADG SG + G G G Sbjct 507 GNKGKKGAPGPSGK----------PGIPGLQGLLGPKGIQGYHGADGISG-NPGKIGPPG 555 Query 1451 NGGNGGNRNSGNGTGGAGGNG-GGANGGAGSAGGSGGGTGGNGGAGGDAGDAGNGGNGNG 1509 G G R GG G G GA G G G SG G+ G G G+ G G Sbjct 556 KQGLPGIR------GGPGRTGLAGAPGPPGVKGSSG--LPGSPGIQGPKGEQGLPGQP-- 605 Query 1510 TGNGGNGGNGGIAGMGGNGGAGTGSGNGGNGGSGGNGGNAGMGGNSGTGSGDGGAGGNGG 1569 GI G G+ GA G G G+ G+ G G G G G G Sbjct 606 ----------GIQGKRGHRGAQ---------GDQGPCGDPGLKGQPGE-YGVQGLTGFQG 645 Query 1570 AAGTGGTGGDGGLTGT----GGTGGSGGTGGDGGNGGNGADNTANMTAQAGGDGGNGGDG 1625 G G GD G+ G G G G TG G G G G G G+ Sbjct 646 FPGPKGPEGDAGIVGISGPKGPIGHRGNTGPLGREGIIGP----------TGRTGPRGEK 695 Query 1626 GFGGGAGAGGGGLTAGANGTGGQGG 1650 GF G TG QG Sbjct 696 GFRGE--------------TGPQGP 706 > XP_016856414.1 collagen alpha-1(XXIV) chain isoform X1 [Homo sapiens] Length=1729 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 277/848 (33%), Positives = 308/848 (36%), Gaps = 171/848 (20%) Query 830 DGGVGG-NGGNGADNTTTAAAGTGTGGQQGNGGNGGNGGTGG-KGGTGGDGALAGSSGGA 887 D G+ G NG G ++G GN G G G KG G +G + GA Sbjct 775 DIGIPGQNGPEGPKELVILWKHEPFISEKGLLGNRGPPGPPGLKGTQGEEGPI-----GA 829 Query 888 GGKGGNGGDAGKAGTGSAPGTAGTGGDGGKGGNGGIGAAGTTGPVGTGASGGTGGSGGAG 947 G+ G G G+ G PG G G+ G GN IG G TGPVG G GS G Sbjct 830 FGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGN--IGKIGETGPVGLPGEVGMTGSIGEK 887 Query 948 GTGGDGGAANGGTAGAGGAGGNGGKGGDGGAGVTSSTAGNSGGAGGSGGKGGDAGAGGAG 1007 G G G G G KG G G G G G G GA G Sbjct 888 GERG----------SPGPLGPQGEKGVMGYPG-----PPGVPGPIGPLGLPGHVGARGP- 931 Query 1008 ATPGANGIAG-NGGDGGDGAAGAVGISGATGA-GD----GGHGGTGGAGGNGGTGGAGGS 1061 PG+ G G G G DG G GI GA G GD G HG G G G G G Sbjct 932 --PGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKP 989 Query 1062 GIDGVGGGTGGTGGNGGNGAIGGAGGDAGGSGNSGGNG--GTGGKGGNAGAGGAAGSNGG 1119 G+ G+ G TG G G G + G GD G G G G GT G+ G G GA G G Sbjct 990 GLQGLPGSTGDRGLPGEPG-LRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVG- 1047 Query 1120 TVGANGTGGDGGNGSAAGAATAGSNGGAGTGSAGGNGGTGGRGGSGGAGGDGIGGVGGGK 1179 TAGS GG TG G G G G G G DG+ GV GG+ Sbjct 1048 --------------------TAGSVGG--TGEPGLRGEPGAPGEEGLQGKDGLKGVPGGR 1085 Query 1180 GGNGADGEVGGAGGAGGSGPNTSPGGNGGQGGQGGSGGAGGAAGAGGAGGGANGTAGNGG 1239 G G DGE G G G GP G+ GQ G G G G G G G G+ G Sbjct 1086 GLPGEDGEKGEMGLPGIIGP-------LGRSGQTGLPGPEGIVGIPGQRGRP-GKKGDKG 1137 Query 1240 QGGA-GGTGGAGAASSATNGGSGGAGGTGGA-GGTGGAGGDGVGGAGGGNGGHGGDAGDG 1297 Q G G G G G GA GT GA G G G DG G G G H G G Sbjct 1138 QIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRG-HQGQPG-- 1194 Query 1298 GNGANGNNRSSGSFLAAGGTGGAAGDGGQGGQ----------GGAGGGAGGQGGAGGAGG 1347 G G G+ G G+ G G G QG G G Sbjct 1195 ----------------PSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGA 1238 Query 1348 TGGNGGNITGGTAGTAGAAGNGGAAGKGGAGGQGGTGGGTGGQGGAGGDGGAGGTGGDRT 1407 G G G G GA G G G+ G G+ G G G +G G G G +G Sbjct 1239 EGYKGH---VGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGK--- 1292 Query 1408 VGGGTVPAGSGGQGGNAGGGGAGGQGGADGGSGGDGGDAGTGGNGGNGGNRNSGNGTGGA 1467 G G G G G G GADG SG + G G G G G R GG Sbjct 1293 -------PGIPGLQGLLGPKGIQGYHGADGISG-NPGKIGPPGKQGLPGIR------GGP 1338 Query 1468 GGNG-GGANGGAGSAGGSGGGTGGNGGAGGDAGDAGNGGNGNGTGNGGNGGNGGIAGMGG 1526 G G GA G G G SG G+ G G G+ G G GI G G Sbjct 1339 GRTGLAGAPGPPGVKGSSG--LPGSPGIQGPKGEQGLPGQP------------GIQGKRG 1384 Query 1527 NGGAGTGSGNGGNGGSGGNGGNAGMGGNSGTGSGDGGAGGNGGAAGTGGTGGDGGLTGT- 1585 + GA G+ G G+ G G G G G G G G G GD G+ G Sbjct 1385 HRGAQ------GDQGPCGDPGLKGQPGEYGVQ----GLTGFQGFPGPKGPEGDAGIVGIS 1434 Query 1586 ---GGTGGSGGTGGDGGNGGNGADNTANMTAQAGGDGGNGGDGGFGGGAGAGGGGLTAGA 1642 G G G TG G G G G G G+ GF G Sbjct 1435 GPKGPIGHRGNTGPLGREGIIGP----------TGRTGPRGEKGFRGE------------ 1472 Query 1643 NGTGGQGG 1650 TG QG Sbjct 1473 --TGPQGP 1478 > XP_016856413.1 collagen alpha-1(XXIV) chain isoform X1 [Homo sapiens] Length=1729 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 277/848 (33%), Positives = 308/848 (36%), Gaps = 171/848 (20%) Query 830 DGGVGG-NGGNGADNTTTAAAGTGTGGQQGNGGNGGNGGTGG-KGGTGGDGALAGSSGGA 887 D G+ G NG G ++G GN G G G KG G +G + GA Sbjct 775 DIGIPGQNGPEGPKELVILWKHEPFISEKGLLGNRGPPGPPGLKGTQGEEGPI-----GA 829 Query 888 GGKGGNGGDAGKAGTGSAPGTAGTGGDGGKGGNGGIGAAGTTGPVGTGASGGTGGSGGAG 947 G+ G G G+ G PG G G+ G GN IG G TGPVG G GS G Sbjct 830 FGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGN--IGKIGETGPVGLPGEVGMTGSIGEK 887 Query 948 GTGGDGGAANGGTAGAGGAGGNGGKGGDGGAGVTSSTAGNSGGAGGSGGKGGDAGAGGAG 1007 G G G G G KG G G G G G G GA G Sbjct 888 GERG----------SPGPLGPQGEKGVMGYPG-----PPGVPGPIGPLGLPGHVGARGP- 931 Query 1008 ATPGANGIAG-NGGDGGDGAAGAVGISGATGA-GD----GGHGGTGGAGGNGGTGGAGGS 1061 PG+ G G G G DG G GI GA G GD G HG G G G G G Sbjct 932 --PGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKP 989 Query 1062 GIDGVGGGTGGTGGNGGNGAIGGAGGDAGGSGNSGGNG--GTGGKGGNAGAGGAAGSNGG 1119 G+ G+ G TG G G G + G GD G G G G GT G+ G G GA G G Sbjct 990 GLQGLPGSTGDRGLPGEPG-LRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVG- 1047 Query 1120 TVGANGTGGDGGNGSAAGAATAGSNGGAGTGSAGGNGGTGGRGGSGGAGGDGIGGVGGGK 1179 TAGS GG TG G G G G G G DG+ GV GG+ Sbjct 1048 --------------------TAGSVGG--TGEPGLRGEPGAPGEEGLQGKDGLKGVPGGR 1085 Query 1180 GGNGADGEVGGAGGAGGSGPNTSPGGNGGQGGQGGSGGAGGAAGAGGAGGGANGTAGNGG 1239 G G DGE G G G GP G+ GQ G G G G G G G G+ G Sbjct 1086 GLPGEDGEKGEMGLPGIIGP-------LGRSGQTGLPGPEGIVGIPGQRGRP-GKKGDKG 1137 Query 1240 QGGA-GGTGGAGAASSATNGGSGGAGGTGGA-GGTGGAGGDGVGGAGGGNGGHGGDAGDG 1297 Q G G G G G GA GT GA G G G DG G G G H G G Sbjct 1138 QIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRG-HQGQPG-- 1194 Query 1298 GNGANGNNRSSGSFLAAGGTGGAAGDGGQGGQ----------GGAGGGAGGQGGAGGAGG 1347 G G G+ G G+ G G G QG G G Sbjct 1195 ----------------PSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGA 1238 Query 1348 TGGNGGNITGGTAGTAGAAGNGGAAGKGGAGGQGGTGGGTGGQGGAGGDGGAGGTGGDRT 1407 G G G G GA G G G+ G G+ G G G +G G G G +G Sbjct 1239 EGYKGH---VGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGK--- 1292 Query 1408 VGGGTVPAGSGGQGGNAGGGGAGGQGGADGGSGGDGGDAGTGGNGGNGGNRNSGNGTGGA 1467 G G G G G G GADG SG + G G G G G R GG Sbjct 1293 -------PGIPGLQGLLGPKGIQGYHGADGISG-NPGKIGPPGKQGLPGIR------GGP 1338 Query 1468 GGNG-GGANGGAGSAGGSGGGTGGNGGAGGDAGDAGNGGNGNGTGNGGNGGNGGIAGMGG 1526 G G GA G G G SG G+ G G G+ G G GI G G Sbjct 1339 GRTGLAGAPGPPGVKGSSG--LPGSPGIQGPKGEQGLPGQP------------GIQGKRG 1384 Query 1527 NGGAGTGSGNGGNGGSGGNGGNAGMGGNSGTGSGDGGAGGNGGAAGTGGTGGDGGLTGT- 1585 + GA G+ G G+ G G G G G G G G G GD G+ G Sbjct 1385 HRGAQ------GDQGPCGDPGLKGQPGEYGVQ----GLTGFQGFPGPKGPEGDAGIVGIS 1434 Query 1586 ---GGTGGSGGTGGDGGNGGNGADNTANMTAQAGGDGGNGGDGGFGGGAGAGGGGLTAGA 1642 G G G TG G G G G G G+ GF G Sbjct 1435 GPKGPIGHRGNTGPLGREGIIGP----------TGRTGPRGEKGFRGE------------ 1472 Query 1643 NGTGGQGG 1650 TG QG Sbjct 1473 --TGPQGP 1478 > XP_016856415.1 collagen alpha-1(XXIV) chain isoform X2 [Homo sapiens] Length=1716 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 277/848 (33%), Positives = 308/848 (36%), Gaps = 171/848 (20%) Query 830 DGGVGG-NGGNGADNTTTAAAGTGTGGQQGNGGNGGNGGTGG-KGGTGGDGALAGSSGGA 887 D G+ G NG G ++G GN G G G KG G +G + GA Sbjct 775 DIGIPGQNGPEGPKELVILWKHEPFISEKGLLGNRGPPGPPGLKGTQGEEGPI-----GA 829 Query 888 GGKGGNGGDAGKAGTGSAPGTAGTGGDGGKGGNGGIGAAGTTGPVGTGASGGTGGSGGAG 947 G+ G G G+ G PG G G+ G GN IG G TGPVG G GS G Sbjct 830 FGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGN--IGKIGETGPVGLPGEVGMTGSIGEK 887 Query 948 GTGGDGGAANGGTAGAGGAGGNGGKGGDGGAGVTSSTAGNSGGAGGSGGKGGDAGAGGAG 1007 G G G G G KG G G G G G G GA G Sbjct 888 GERG----------SPGPLGPQGEKGVMGYPG-----PPGVPGPIGPLGLPGHVGARGP- 931 Query 1008 ATPGANGIAG-NGGDGGDGAAGAVGISGATGA-GD----GGHGGTGGAGGNGGTGGAGGS 1061 PG+ G G G G DG G GI GA G GD G HG G G G G G Sbjct 932 --PGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKP 989 Query 1062 GIDGVGGGTGGTGGNGGNGAIGGAGGDAGGSGNSGGNG--GTGGKGGNAGAGGAAGSNGG 1119 G+ G+ G TG G G G + G GD G G G G GT G+ G G GA G G Sbjct 990 GLQGLPGSTGDRGLPGEPG-LRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVG- 1047 Query 1120 TVGANGTGGDGGNGSAAGAATAGSNGGAGTGSAGGNGGTGGRGGSGGAGGDGIGGVGGGK 1179 TAGS GG TG G G G G G G DG+ GV GG+ Sbjct 1048 --------------------TAGSVGG--TGEPGLRGEPGAPGEEGLQGKDGLKGVPGGR 1085 Query 1180 GGNGADGEVGGAGGAGGSGPNTSPGGNGGQGGQGGSGGAGGAAGAGGAGGGANGTAGNGG 1239 G G DGE G G G GP G+ GQ G G G G G G G G+ G Sbjct 1086 GLPGEDGEKGEMGLPGIIGP-------LGRSGQTGLPGPEGIVGIPGQRGRP-GKKGDKG 1137 Query 1240 QGGA-GGTGGAGAASSATNGGSGGAGGTGGA-GGTGGAGGDGVGGAGGGNGGHGGDAGDG 1297 Q G G G G G GA GT GA G G G DG G G G H G G Sbjct 1138 QIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRG-HQGQPG-- 1194 Query 1298 GNGANGNNRSSGSFLAAGGTGGAAGDGGQGGQ----------GGAGGGAGGQGGAGGAGG 1347 G G G+ G G+ G G G QG G G Sbjct 1195 ----------------PSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGA 1238 Query 1348 TGGNGGNITGGTAGTAGAAGNGGAAGKGGAGGQGGTGGGTGGQGGAGGDGGAGGTGGDRT 1407 G G G G GA G G G+ G G+ G G G +G G G G +G Sbjct 1239 EGYKGH---VGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGK--- 1292 Query 1408 VGGGTVPAGSGGQGGNAGGGGAGGQGGADGGSGGDGGDAGTGGNGGNGGNRNSGNGTGGA 1467 G G G G G G GADG SG + G G G G G R GG Sbjct 1293 -------PGIPGLQGLLGPKGIQGYHGADGISG-NPGKIGPPGKQGLPGIR------GGP 1338 Query 1468 GGNG-GGANGGAGSAGGSGGGTGGNGGAGGDAGDAGNGGNGNGTGNGGNGGNGGIAGMGG 1526 G G GA G G G SG G+ G G G+ G G GI G G Sbjct 1339 GRTGLAGAPGPPGVKGSSG--LPGSPGIQGPKGEQGLPGQP------------GIQGKRG 1384 Query 1527 NGGAGTGSGNGGNGGSGGNGGNAGMGGNSGTGSGDGGAGGNGGAAGTGGTGGDGGLTGT- 1585 + GA G+ G G+ G G G G G G G G G GD G+ G Sbjct 1385 HRGAQ------GDQGPCGDPGLKGQPGEYGVQ----GLTGFQGFPGPKGPEGDAGIVGIS 1434 Query 1586 ---GGTGGSGGTGGDGGNGGNGADNTANMTAQAGGDGGNGGDGGFGGGAGAGGGGLTAGA 1642 G G G TG G G G G G G+ GF G Sbjct 1435 GPKGPIGHRGNTGPLGREGIIGP----------TGRTGPRGEKGFRGE------------ 1472 Query 1643 NGTGGQGG 1650 TG QG Sbjct 1473 --TGPQGP 1478 > XP_047272961.1 collagen alpha-1(XXIV) chain isoform X3 [Homo sapiens] Length=1714 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 261/790 (33%), Positives = 287/790 (36%), Gaps = 164/790 (21%) Query 886 GAGGKGGNGGDAGKAGTGSAPGTAGTGGDGGKGGNGGIGAAGTTGPVGTGASGGTGGSGG 945 GA G+ G G G+ G PG G G+ G GN IG G TGPVG G GS G Sbjct 813 GAFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGN--IGKIGETGPVGLPGEVGMTGSIG 870 Query 946 AGGTGGDGGAANGGTAGAGGAGGNGGKGGDGGAGVTSSTAGNSGGAGGSGGKGGDAGAGG 1005 G G G G G KG G G G G G G GA G Sbjct 871 EKGERG----------SPGPLGPQGEKGVMGYPG-----PPGVPGPIGPLGLPGHVGARG 915 Query 1006 AGATPGANGIAG-NGGDGGDGAAGAVGISGATGA-GD----GGHGGTGGAGGNGGTGGAG 1059 PG+ G G G G DG G GI GA G GD G HG G G G G G Sbjct 916 P---PGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQG 972 Query 1060 GSGIDGVGGGTGGTGGNGGNGAIGGAGGDAGGSGNSGGNG--GTGGKGGNAGAGGAAGSN 1117 G+ G+ G TG G G G + G GD G G G G GT G+ G G GA G Sbjct 973 KPGLQGLPGSTGDRGLPGEPG-LRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDV 1031 Query 1118 GGTVGANGTGGDGGNGSAAGAATAGSNGGAGTGSAGGNGGTGGRGGSGGAGGDGIGGVGG 1177 G TAGS GG TG G G G G G G DG+ GV G Sbjct 1032 G---------------------TAGSVGG--TGEPGLRGEPGAPGEEGLQGKDGLKGVPG 1068 Query 1178 GKGGNGADGEVGGAGGAGGSGPNTSPGGNGGQGGQGGSGGAGGAAGAGGAGGGANGTAGN 1237 G+G G DGE G G G GP G+ GQ G G G G G G G G+ Sbjct 1069 GRGLPGEDGEKGEMGLPGIIGP-------LGRSGQTGLPGPEGIVGIPGQRGRP-GKKGD 1120 Query 1238 GGQGGA-GGTGGAGAASSATNGGSGGAGGTGGA-GGTGGAGGDGVGGAGGGNGGHGGDAG 1295 GQ G G G G G GA GT GA G G G DG G G G H G G Sbjct 1121 KGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRG-HQGQPG 1179 Query 1296 DGGNGANGNNRSSGSFLAAGGTGGAAGDGGQGGQ----------GGAGGGAGGQGGAGGA 1345 G G G+ G G+ G G G QG G Sbjct 1180 ------------------PSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEP 1221 Query 1346 GGTGGNGGNITGGTAGTAGAAGNGGAAGKGGAGGQGGTGGGTGGQGGAGGDGGAGGTGGD 1405 G G G G G GA G G G+ G G+ G G G +G G G G +G Sbjct 1222 GAEGYKGH---VGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGK- 1277 Query 1406 RTVGGGTVPAGSGGQGGNAGGGGAGGQGGADGGSGGDGGDAGTGGNGGNGGNRNSGNGTG 1465 G G G G G G GADG SG + G G G G G R G Sbjct 1278 ---------PGIPGLQGLLGPKGIQGYHGADGISG-NPGKIGPPGKQGLPGIR------G 1321 Query 1466 GAGGNG-GGANGGAGSAGGSGGGTGGNGGAGGDAGDAGNGGNGNGTGNGGNGGNGGIAGM 1524 G G G GA G G G SG G+ G G G+ G G GI G Sbjct 1322 GPGRTGLAGAPGPPGVKGSSG--LPGSPGIQGPKGEQGLPGQP------------GIQGK 1367 Query 1525 GGNGGAGTGSGNGGNGGSGGNGGNAGMGGNSGTGSGDGGAGGNGGAAGTGGTGGDGGLTG 1584 G+ GA G+ G G+ G G G G G G G G G GD G+ G Sbjct 1368 RGHRGAQ------GDQGPCGDPGLKGQPGEYGVQ----GLTGFQGFPGPKGPEGDAGIVG 1417 Query 1585 T----GGTGGSGGTGGDGGNGGNGADNTANMTAQAGGDGGNGGDGGFGGGAGAGGGGLTA 1640 G G G TG G G G G G G+ GF G Sbjct 1418 ISGPKGPIGHRGNTGPLGREGIIGP----------TGRTGPRGEKGFRGE---------- 1457 Query 1641 GANGTGGQGG 1650 TG QG Sbjct 1458 ----TGPQGP 1463 > XP_047272960.1 collagen alpha-1(XXIV) chain isoform X3 [Homo sapiens] Length=1714 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 261/790 (33%), Positives = 287/790 (36%), Gaps = 164/790 (21%) Query 886 GAGGKGGNGGDAGKAGTGSAPGTAGTGGDGGKGGNGGIGAAGTTGPVGTGASGGTGGSGG 945 GA G+ G G G+ G PG G G+ G GN IG G TGPVG G GS G Sbjct 813 GAFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGN--IGKIGETGPVGLPGEVGMTGSIG 870 Query 946 AGGTGGDGGAANGGTAGAGGAGGNGGKGGDGGAGVTSSTAGNSGGAGGSGGKGGDAGAGG 1005 G G G G G KG G G G G G G GA G Sbjct 871 EKGERG----------SPGPLGPQGEKGVMGYPG-----PPGVPGPIGPLGLPGHVGARG 915 Query 1006 AGATPGANGIAG-NGGDGGDGAAGAVGISGATGA-GD----GGHGGTGGAGGNGGTGGAG 1059 PG+ G G G G DG G GI GA G GD G HG G G G G G Sbjct 916 P---PGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQG 972 Query 1060 GSGIDGVGGGTGGTGGNGGNGAIGGAGGDAGGSGNSGGNG--GTGGKGGNAGAGGAAGSN 1117 G+ G+ G TG G G G + G GD G G G G GT G+ G G GA G Sbjct 973 KPGLQGLPGSTGDRGLPGEPG-LRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDV 1031 Query 1118 GGTVGANGTGGDGGNGSAAGAATAGSNGGAGTGSAGGNGGTGGRGGSGGAGGDGIGGVGG 1177 G TAGS GG TG G G G G G G DG+ GV G Sbjct 1032 G---------------------TAGSVGG--TGEPGLRGEPGAPGEEGLQGKDGLKGVPG 1068 Query 1178 GKGGNGADGEVGGAGGAGGSGPNTSPGGNGGQGGQGGSGGAGGAAGAGGAGGGANGTAGN 1237 G+G G DGE G G G GP G+ GQ G G G G G G G G+ Sbjct 1069 GRGLPGEDGEKGEMGLPGIIGP-------LGRSGQTGLPGPEGIVGIPGQRGRP-GKKGD 1120 Query 1238 GGQGGA-GGTGGAGAASSATNGGSGGAGGTGGA-GGTGGAGGDGVGGAGGGNGGHGGDAG 1295 GQ G G G G G GA GT GA G G G DG G G G H G G Sbjct 1121 KGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRG-HQGQPG 1179 Query 1296 DGGNGANGNNRSSGSFLAAGGTGGAAGDGGQGGQ----------GGAGGGAGGQGGAGGA 1345 G G G+ G G+ G G G QG G Sbjct 1180 ------------------PSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEP 1221 Query 1346 GGTGGNGGNITGGTAGTAGAAGNGGAAGKGGAGGQGGTGGGTGGQGGAGGDGGAGGTGGD 1405 G G G G G GA G G G+ G G+ G G G +G G G G +G Sbjct 1222 GAEGYKGH---VGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGK- 1277 Query 1406 RTVGGGTVPAGSGGQGGNAGGGGAGGQGGADGGSGGDGGDAGTGGNGGNGGNRNSGNGTG 1465 G G G G G G GADG SG + G G G G G R G Sbjct 1278 ---------PGIPGLQGLLGPKGIQGYHGADGISG-NPGKIGPPGKQGLPGIR------G 1321 Query 1466 GAGGNG-GGANGGAGSAGGSGGGTGGNGGAGGDAGDAGNGGNGNGTGNGGNGGNGGIAGM 1524 G G G GA G G G SG G+ G G G+ G G GI G Sbjct 1322 GPGRTGLAGAPGPPGVKGSSG--LPGSPGIQGPKGEQGLPGQP------------GIQGK 1367 Query 1525 GGNGGAGTGSGNGGNGGSGGNGGNAGMGGNSGTGSGDGGAGGNGGAAGTGGTGGDGGLTG 1584 G+ GA G+ G G+ G G G G G G G G G GD G+ G Sbjct 1368 RGHRGAQ------GDQGPCGDPGLKGQPGEYGVQ----GLTGFQGFPGPKGPEGDAGIVG 1417 Query 1585 T----GGTGGSGGTGGDGGNGGNGADNTANMTAQAGGDGGNGGDGGFGGGAGAGGGGLTA 1640 G G G TG G G G G G G+ GF G Sbjct 1418 ISGPKGPIGHRGNTGPLGREGIIGP----------TGRTGPRGEKGFRGE---------- 1457 Query 1641 GANGTGGQGG 1650 TG QG Sbjct 1458 ----TGPQGP 1463 > XP_047272957.1 collagen alpha-1(XXIV) chain isoform X3 [Homo sapiens] Length=1714 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 261/790 (33%), Positives = 287/790 (36%), Gaps = 164/790 (21%) Query 886 GAGGKGGNGGDAGKAGTGSAPGTAGTGGDGGKGGNGGIGAAGTTGPVGTGASGGTGGSGG 945 GA G+ G G G+ G PG G G+ G GN IG G TGPVG G GS G Sbjct 813 GAFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGN--IGKIGETGPVGLPGEVGMTGSIG 870 Query 946 AGGTGGDGGAANGGTAGAGGAGGNGGKGGDGGAGVTSSTAGNSGGAGGSGGKGGDAGAGG 1005 G G G G G KG G G G G G G GA G Sbjct 871 EKGERG----------SPGPLGPQGEKGVMGYPG-----PPGVPGPIGPLGLPGHVGARG 915 Query 1006 AGATPGANGIAG-NGGDGGDGAAGAVGISGATGA-GD----GGHGGTGGAGGNGGTGGAG 1059 PG+ G G G G DG G GI GA G GD G HG G G G G G Sbjct 916 P---PGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQG 972 Query 1060 GSGIDGVGGGTGGTGGNGGNGAIGGAGGDAGGSGNSGGNG--GTGGKGGNAGAGGAAGSN 1117 G+ G+ G TG G G G + G GD G G G G GT G+ G G GA G Sbjct 973 KPGLQGLPGSTGDRGLPGEPG-LRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDV 1031 Query 1118 GGTVGANGTGGDGGNGSAAGAATAGSNGGAGTGSAGGNGGTGGRGGSGGAGGDGIGGVGG 1177 G TAGS GG TG G G G G G G DG+ GV G Sbjct 1032 G---------------------TAGSVGG--TGEPGLRGEPGAPGEEGLQGKDGLKGVPG 1068 Query 1178 GKGGNGADGEVGGAGGAGGSGPNTSPGGNGGQGGQGGSGGAGGAAGAGGAGGGANGTAGN 1237 G+G G DGE G G G GP G+ GQ G G G G G G G G+ Sbjct 1069 GRGLPGEDGEKGEMGLPGIIGP-------LGRSGQTGLPGPEGIVGIPGQRGRP-GKKGD 1120 Query 1238 GGQGGA-GGTGGAGAASSATNGGSGGAGGTGGA-GGTGGAGGDGVGGAGGGNGGHGGDAG 1295 GQ G G G G G GA GT GA G G G DG G G G H G G Sbjct 1121 KGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRG-HQGQPG 1179 Query 1296 DGGNGANGNNRSSGSFLAAGGTGGAAGDGGQGGQ----------GGAGGGAGGQGGAGGA 1345 G G G+ G G+ G G G QG G Sbjct 1180 ------------------PSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEP 1221 Query 1346 GGTGGNGGNITGGTAGTAGAAGNGGAAGKGGAGGQGGTGGGTGGQGGAGGDGGAGGTGGD 1405 G G G G G GA G G G+ G G+ G G G +G G G G +G Sbjct 1222 GAEGYKGH---VGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGK- 1277 Query 1406 RTVGGGTVPAGSGGQGGNAGGGGAGGQGGADGGSGGDGGDAGTGGNGGNGGNRNSGNGTG 1465 G G G G G G GADG SG + G G G G G R G Sbjct 1278 ---------PGIPGLQGLLGPKGIQGYHGADGISG-NPGKIGPPGKQGLPGIR------G 1321 Query 1466 GAGGNG-GGANGGAGSAGGSGGGTGGNGGAGGDAGDAGNGGNGNGTGNGGNGGNGGIAGM 1524 G G G GA G G G SG G+ G G G+ G G GI G Sbjct 1322 GPGRTGLAGAPGPPGVKGSSG--LPGSPGIQGPKGEQGLPGQP------------GIQGK 1367 Query 1525 GGNGGAGTGSGNGGNGGSGGNGGNAGMGGNSGTGSGDGGAGGNGGAAGTGGTGGDGGLTG 1584 G+ GA G+ G G+ G G G G G G G G G GD G+ G Sbjct 1368 RGHRGAQ------GDQGPCGDPGLKGQPGEYGVQ----GLTGFQGFPGPKGPEGDAGIVG 1417 Query 1585 T----GGTGGSGGTGGDGGNGGNGADNTANMTAQAGGDGGNGGDGGFGGGAGAGGGGLTA 1640 G G G TG G G G G G G+ GF G Sbjct 1418 ISGPKGPIGHRGNTGPLGREGIIGP----------TGRTGPRGEKGFRGE---------- 1457 Query 1641 GANGTGGQGG 1650 TG QG Sbjct 1458 ----TGPQGP 1463 > NP_690850.2 collagen alpha-1(XXIV) chain isoform 1 precursor [Homo sapiens] Length=1714 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 261/790 (33%), Positives = 287/790 (36%), Gaps = 164/790 (21%) Query 886 GAGGKGGNGGDAGKAGTGSAPGTAGTGGDGGKGGNGGIGAAGTTGPVGTGASGGTGGSGG 945 GA G+ G G G+ G PG G G+ G GN IG G TGPVG G GS G Sbjct 813 GAFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGN--IGKIGETGPVGLPGEVGMTGSIG 870 Query 946 AGGTGGDGGAANGGTAGAGGAGGNGGKGGDGGAGVTSSTAGNSGGAGGSGGKGGDAGAGG 1005 G G G G G KG G G G G G G GA G Sbjct 871 EKGERG----------SPGPLGPQGEKGVMGYPG-----PPGVPGPIGPLGLPGHVGARG 915 Query 1006 AGATPGANGIAG-NGGDGGDGAAGAVGISGATGA-GD----GGHGGTGGAGGNGGTGGAG 1059 PG+ G G G G DG G GI GA G GD G HG G G G G G Sbjct 916 P---PGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQG 972 Query 1060 GSGIDGVGGGTGGTGGNGGNGAIGGAGGDAGGSGNSGGNG--GTGGKGGNAGAGGAAGSN 1117 G+ G+ G TG G G G + G GD G G G G GT G+ G G GA G Sbjct 973 KPGLQGLPGSTGDRGLPGEPG-LRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDV 1031 Query 1118 GGTVGANGTGGDGGNGSAAGAATAGSNGGAGTGSAGGNGGTGGRGGSGGAGGDGIGGVGG 1177 G TAGS GG TG G G G G G G DG+ GV G Sbjct 1032 G---------------------TAGSVGG--TGEPGLRGEPGAPGEEGLQGKDGLKGVPG 1068 Query 1178 GKGGNGADGEVGGAGGAGGSGPNTSPGGNGGQGGQGGSGGAGGAAGAGGAGGGANGTAGN 1237 G+G G DGE G G G GP G+ GQ G G G G G G G G+ Sbjct 1069 GRGLPGEDGEKGEMGLPGIIGP-------LGRSGQTGLPGPEGIVGIPGQRGRP-GKKGD 1120 Query 1238 GGQGGA-GGTGGAGAASSATNGGSGGAGGTGGA-GGTGGAGGDGVGGAGGGNGGHGGDAG 1295 GQ G G G G G GA GT GA G G G DG G G G H G G Sbjct 1121 KGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRG-HQGQPG 1179 Query 1296 DGGNGANGNNRSSGSFLAAGGTGGAAGDGGQGGQ----------GGAGGGAGGQGGAGGA 1345 G G G+ G G+ G G G QG G Sbjct 1180 ------------------PSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEP 1221 Query 1346 GGTGGNGGNITGGTAGTAGAAGNGGAAGKGGAGGQGGTGGGTGGQGGAGGDGGAGGTGGD 1405 G G G G G GA G G G+ G G+ G G G +G G G G +G Sbjct 1222 GAEGYKGH---VGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGK- 1277 Query 1406 RTVGGGTVPAGSGGQGGNAGGGGAGGQGGADGGSGGDGGDAGTGGNGGNGGNRNSGNGTG 1465 G G G G G G GADG SG + G G G G G R G Sbjct 1278 ---------PGIPGLQGLLGPKGIQGYHGADGISG-NPGKIGPPGKQGLPGIR------G 1321 Query 1466 GAGGNG-GGANGGAGSAGGSGGGTGGNGGAGGDAGDAGNGGNGNGTGNGGNGGNGGIAGM 1524 G G G GA G G G SG G+ G G G+ G G GI G Sbjct 1322 GPGRTGLAGAPGPPGVKGSSG--LPGSPGIQGPKGEQGLPGQP------------GIQGK 1367 Query 1525 GGNGGAGTGSGNGGNGGSGGNGGNAGMGGNSGTGSGDGGAGGNGGAAGTGGTGGDGGLTG 1584 G+ GA G+ G G+ G G G G G G G G G GD G+ G Sbjct 1368 RGHRGAQ------GDQGPCGDPGLKGQPGEYGVQ----GLTGFQGFPGPKGPEGDAGIVG 1417 Query 1585 T----GGTGGSGGTGGDGGNGGNGADNTANMTAQAGGDGGNGGDGGFGGGAGAGGGGLTA 1640 G G G TG G G G G G G+ GF G Sbjct 1418 ISGPKGPIGHRGNTGPLGREGIIGP----------TGRTGPRGEKGFRGE---------- 1457 Query 1641 GANGTGGQGG 1650 TG QG Sbjct 1458 ----TGPQGP 1463 > NP_001336884.1 collagen alpha-1(XXIV) chain isoform 2 [Homo sapiens] Length=1014 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 259/803 (32%), Positives = 290/803 (36%), Gaps = 165/803 (21%) Query 871 KGGTGGDGALAGSSGGAGGKGGNGGDAGKAGTGSAPGTAGTGGDGGKGGNGGIGAAGTTG 930 KG G +G + GA G+ G G G+ G PG G G+ G GN IG G TG Sbjct 103 KGTQGEEGPI-----GAFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGN--IGKIGETG 155 Query 931 PVGT-GASGGTGGSGGAGGTGGDGGAANGGTAGAGGAGGNGGKGGDGGAGVTSSTAGNSG 989 PVG G G TG G G G G G G G G G G G G G Sbjct 156 PVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARG 215 Query 990 GAGGSGGKGGDAGAGGAGATPGANGIAGNGGDGGDGAAGAVGISGATGA-GD----GGHG 1044 G G KG G G DG G GI GA G GD G HG Sbjct 216 PPGSQGPKGQ------------------RGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHG 257 Query 1045 GTGGAGGNGGTGGAGGSGIDGVGGGTGGTGGNGGNGAIGGAGGDAGGSGNSGGNG--GTG 1102 G G G G G G+ G+ G TG G G G + G GD G G G G GT Sbjct 258 LIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPG-LRGLQGDVGPPGEMGMEGPPGTE 316 Query 1103 GKGGNAGAGGAAGSNGGTVGANGTGGDGGNGSAAGAATAGSNGGAGTGSAGGNGGTGGRG 1162 G+ G G GA G G TAGS GG TG G G G G Sbjct 317 GESGLQGEPGAKGDVG---------------------TAGSVGG--TGEPGLRGEPGAPG 353 Query 1163 GSGGAGGDGIGGVGGGKGGNGADGEVGGAGGAGGSGPNTSPGGNGGQGGQGGSGGAGGAA 1222 G G DG+ GV GG+G G DGE G G G GP G+ GQ G G G Sbjct 354 EEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPL-------GRSGQTGLPGPEGIV 406 Query 1223 GAGGAGGGANGTAGNGGQGGAGGTGGAGAASSATNGGSGGAGGTGGAGGTGGAGGDGVGG 1282 G G G G G+ GQ G TG G+ G G G +G G G G Sbjct 407 GIPGQRGRP-GKKGDKGQ--IGPTGEVGSR-----------GPPGKIGKSGPKGARGTRG 452 Query 1283 AGGGNGGHGGDAGDGGNGANGNNRSSGSFLAAGGTGGAAGDGGQGGQ----------GGA 1332 A G G G D G G G+ G G G G+ G G+ G Sbjct 453 AVGHLGLMGPDGEPGIPGYRGHQGQPG----PSGLPGPKGEKGYPGEDSTVLGPPGPRGE 508 Query 1333 GGGAGGQGGAGGAGGTGGNGGNITGGTAGTAGAAGNGGAAGKGGAGGQGGTGGGTGGQGG 1392 G G QG G G G G G G GA G G G+ G G+ G G G +G Sbjct 509 PGPVGDQGERGEPGAEGYKGHV---GVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGN 565 Query 1393 AGGDGGAGGTGGDRTVGGGTVPAGSGGQGGNAGGGGAGGQGGADGGSGGDGGDAGTGGNG 1452 G G G +G G G G G G G GADG SG + G G G Sbjct 566 KGKKGAPGPSGK----------PGIPGLQGLLGPKGIQGYHGADGISG-NPGKIGPPGKQ 614 Query 1453 GNGGNRNSGNGTGGAGGNG-GGANGGAGSAGGSGGGTGGNGGAGGDAGDAGNGGNGNGTG 1511 G G R GG G G GA G G G SG G+ G G G+ G G Sbjct 615 GLPGIR------GGPGRTGLAGAPGPPGVKGSSG--LPGSPGIQGPKGEQGLPGQP---- 662 Query 1512 NGGNGGNGGIAGMGGNGGAGTGSGNGGNGGSGGNGGNAGMGGNSGTGSGDGGAGGNGGAA 1571 GI G G+ GA G G+ G G G G+ G +G G Sbjct 663 --------GIQGKRGHRGAQGDQGPCGDPGLKGQPGEYGVQGLTGFQ----------GFP 704 Query 1572 GTGGTGGDGGLTGT----GGTGGSGGTGGDGGNGGNGADNTANMTAQAGGDGGNGGDGGF 1627 G G GD G+ G G G G TG G G G G G G+ GF Sbjct 705 GPKGPEGDAGIVGISGPKGPIGHRGNTGPLGREGIIGP----------TGRTGPRGEKGF 754 Query 1628 GGGAGAGGGGLTAGANGTGGQGG 1650 G TG QG Sbjct 755 RGE--------------TGPQGP 763 > XP_047272978.1 collagen alpha-1(XXIV) chain isoform X7 [Homo sapiens] Length=1238 Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust. Identities = 113/328 (34%), Positives = 131/328 (40%), Gaps = 43/328 (13%) Query 1563 GAGGNGGAAGTGGTGGDGGLTGTGGTGGSGGTGGD-GGNGGNGADNTANMTAQAGGDGGN 1621 G G+ G G G+ G GL G G G+ G GD G G +G G GN Sbjct 930 GPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGL----------IGKTGN 979 Query 1622 GGDGGFGGGAGAGGGGLT-----AGANGTGGQGGAGGD-GGNGAIGGHGP--------LT 1667 G+ GF G G GL G G G G GD G G +G GP L Sbjct 980 PGERGFQGKPGL--QGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQ 1037 Query 1668 DDPGGNGGTGGNGGTGGTGGAGIGSLGGGTGGDGGNGGNGGTGGEGGEVGGAGGTGGAAG 1727 +PG G G G GGTG G L G G G G G G +G V G G G G Sbjct 1038 GEPGAKGDVGTAGSVGGTGEPG---LRGEPGAPGEEGLQGKDGLKG--VPGGRGLPGEDG 1092 Query 1728 NGGDGGTGGTGGGDGGAGGTGGTGGTGGLGDP----RVGGSGGDGGTGGSGGAAGNGGNG 1783 G+ G G G G +G TG G G +G P R G GD G G G G+ G Sbjct 1093 EKGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGR-PGKKGDKGQIGPTGEVGSRGPP 1151 Query 1784 GNAGAGGNGNGGTGGAGGIGGTGGNGGDAEPGVPPGAGG----AGGAGTTGGKGGTGGNG 1839 G G G G G G +G G G D EPG+ PG G G +G G KG G G Sbjct 1152 GKIGKSG-PKGARGTRGAVGHLGLMGPDGEPGI-PGYRGHQGQPGPSGLPGPKGEKGYPG 1209 Query 1840 SGTGSGGTGGDGGTGGGGGNGGTGWNGG 1867 + G G G+ GG W+ G Sbjct 1210 EDSTVLGPPGPRGSSGGPRRERRAWSRG 1237 > XP_016856416.1 collagen alpha-1(XXIV) chain isoform X4 [Homo sapiens] Length=1711 Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust. Identities = 215/656 (33%), Positives = 237/656 (36%), Gaps = 143/656 (22%) Query 1019 GGDGGDGAAGAVGISGATGA-GD----GGHGGTGGAGGNGGTGGAGGSGIDGVGGGTGGT 1073 G G DG G GI GA G GD G HG G G G G G G+ G+ G TG Sbjct 924 GSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDR 983 Query 1074 GGNGGNGAIGGAGGDAGGSGNSGGNG--GTGGKGGNAGAGGAAGSNGGTVGANGTGGDGG 1131 G G G + G GD G G G G GT G+ G G GA G G Sbjct 984 GLPGEPG-LRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVG------------- 1029 Query 1132 NGSAAGAATAGSNGGAGTGSAGGNGGTGGRGGSGGAGGDGIGGVGGGKGGNGADGEVGGA 1191 TAGS GG TG G G G G G G DG+ GV GG+G G DGE G Sbjct 1030 --------TAGSVGG--TGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEM 1079 Query 1192 GGAGGSGPNTSPGGNGGQGGQGGSGGAGGAAGAGGAGGGANGTAGNGGQGGA-GGTGGAG 1250 G G GP G+ GQ G G G G G G G G+ GQ G G G G Sbjct 1080 GLPGIIGP-------LGRSGQTGLPGPEGIVGIPGQRGRP-GKKGDKGQIGPTGEVGSRG 1131 Query 1251 AASSATNGGSGGAGGTGGA-GGTGGAGGDGVGGAGGGNGGHGGDAGDGGNGANGNNRSSG 1309 G GA GT GA G G G DG G G G H G G Sbjct 1132 PPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRG-HQGQPG-------------- 1176 Query 1310 SFLAAGGTGGAAGDGGQGGQ----------GGAGGGAGGQGGAGGAGGTGGNGGNITGGT 1359 G G G+ G G+ G G G QG G G G G G Sbjct 1177 ----PSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEGYKGH---VGV 1229 Query 1360 AGTAGAAGNGGAAGKGGAGGQGGTGGGTGGQGGAGGDGGAGGTGGDRTVGGGTVPAGSGG 1419 G GA G G G+ G G+ G G G +G G G G +G G G Sbjct 1230 PGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGK----------PGIPG 1279 Query 1420 QGGNAGGGGAGGQGGADGGSGGDGGDAGTGGNGGNGGNRNSGNGTGGAGGNG-GGANGGA 1478 G G G G GADG SG + G G G G G R GG G G GA G Sbjct 1280 LQGLLGPKGIQGYHGADGISG-NPGKIGPPGKQGLPGIR------GGPGRTGLAGAPGPP 1332 Query 1479 GSAGGSGGGTGGNGGAGGDAGDAGNGGNGNGTGNGGNGGNGGIAGMGGNGGAGTGSGNGG 1538 G G SG G+ G G G+ G G GI G G+ GA G Sbjct 1333 GVKGSSG--LPGSPGIQGPKGEQGLPGQP------------GIQGKRGHRGAQ------G 1372 Query 1539 NGGSGGNGGNAGMGGNSGTGSGDGGAGGNGGAAGTGGTGGDGGLTGT----GGTGGSGGT 1594 + G G+ G G G G G G G G G GD G+ G G G G T Sbjct 1373 DQGPCGDPGLKGQPGEYGVQ----GLTGFQGFPGPKGPEGDAGIVGISGPKGPIGHRGNT 1428 Query 1595 GGDGGNGGNGADNTANMTAQAGGDGGNGGDGGFGGGAGAGGGGLTAGANGTGGQGG 1650 G G G G G G G+ GF G TG QG Sbjct 1429 GPLGREGIIGP----------TGRTGPRGEKGFRGE--------------TGPQGP 1460 > XP_047272972.1 collagen alpha-1(XXIV) chain isoform X6 [Homo sapiens] Length=1678 Score = 43.5 bits (101), Expect = 0.012, Method: Compositional matrix adjust. Identities = 196/585 (34%), Positives = 220/585 (38%), Gaps = 107/585 (18%) Query 886 GAGGKGGNGGDAGKAGTGSAPGTAGTGGDGGKGGNGGIGAAGTTGPVGTGASGGTGGSGG 945 GA G+ G G G+ G PG G G+ G GN IG G TGPVG G GS G Sbjct 813 GAFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGN--IGKIGETGPVGLPGEVGMTGSIG 870 Query 946 AGGTGGDGGAANGGTAGAGGAGGNGGKGGDGGAGVTSSTAGNSGGAGGSGGKGGDAGAGG 1005 G G G G G KG G G G G G G GA G Sbjct 871 EKGERG----------SPGPLGPQGEKGVMGYPG-----PPGVPGPIGPLGLPGHVGARG 915 Query 1006 AGATPGANGIAG-NGGDGGDGAAGAVGISGATGA-GD----GGHGGTGGAGGNGGTGGAG 1059 PG+ G G G G DG G GI GA G GD G HG G G G G G Sbjct 916 P---PGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQG 972 Query 1060 GSGIDGVGGGTGGTGGNGGNGAIGGAGGDAGGSGNSGGNG--GTGGKGGNAGAGGA---- 1113 G+ G+ G TG G G G + G GD G G G G GT G+ G G GA Sbjct 973 KPGLQGLPGSTGDRGLPGEPG-LRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDV 1031 Query 1114 --AGSNGGT--------VGANGT----GGDGGNGSAAGAATAGSNGGAG-TGSAGGNGGT 1158 AGS GGT GA G G DG G G G +G G G G G Sbjct 1032 GTAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPL 1091 Query 1159 GGRGGSGGAGGDGIGGVGGGKGGNGADG---------EVG---GAGGAGGSGPN----T- 1201 G G +G G +GI G+ G +G G G EVG G G SGP T Sbjct 1092 GRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTR 1151 Query 1202 -------------SPGGNGGQGGQGGSGGAGGAAGAGGAGGGANGTAGNGGQGGAGGTGG 1248 PG G +G QG G +G G G G G+ Sbjct 1152 GAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLP--------GPKGEKGYPGEDSTVLGPP 1203 Query 1249 AGAASSATNGGSGGAGGTGGAGGTGGAGGDGVGGAGGGNG--GHGGDAGD----GGNGAN 1302 G G G G G G G G+ GA G G G GD G+ G G+ Sbjct 1204 GPRGEPGPVGDQGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSE 1263 Query 1303 GNNRSSGSFLAAGGTGGAAGDGGQGGQGGAGGGAGGQG--GAGGAGGTGGNGGNITGGTA 1360 GN G GA G G+ G G G G +G G GA G GN G I G Sbjct 1264 GNK----------GKKGAPGPSGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKI--GPP 1311 Query 1361 GTAGAAGNGGAAGKGGAGGQGGTGGGTGGQGGAGGDGGAGGTGGD 1405 G G G G G+ G G+ G G G QG GD G G G+ Sbjct 1312 GKQGLPGEQGLPGQPGIQGKRGHRGAQGDQGPC-GDPGLKGQPGE 1355 > XP_047272971.1 collagen alpha-1(XXIV) chain isoform X5 [Homo sapiens] Length=1683 Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust. Identities = 215/656 (33%), Positives = 237/656 (36%), Gaps = 143/656 (22%) Query 1019 GGDGGDGAAGAVGISGATGA-GD----GGHGGTGGAGGNGGTGGAGGSGIDGVGGGTGGT 1073 G G DG G GI GA G GD G HG G G G G G G+ G+ G TG Sbjct 909 GSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDR 968 Query 1074 GGNGGNGAIGGAGGDAGGSGNSGGNG--GTGGKGGNAGAGGAAGSNGGTVGANGTGGDGG 1131 G G G + G GD G G G G GT G+ G G GA G G Sbjct 969 GLPGEPG-LRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVG------------- 1014 Query 1132 NGSAAGAATAGSNGGAGTGSAGGNGGTGGRGGSGGAGGDGIGGVGGGKGGNGADGEVGGA 1191 TAGS GG TG G G G G G G DG+ GV GG+G G DGE G Sbjct 1015 --------TAGSVGG--TGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEM 1064 Query 1192 GGAGGSGPNTSPGGNGGQGGQGGSGGAGGAAGAGGAGGGANGTAGNGGQGGA-GGTGGAG 1250 G G GP G+ GQ G G G G G G G G+ GQ G G G G Sbjct 1065 GLPGIIGP-------LGRSGQTGLPGPEGIVGIPGQRGRP-GKKGDKGQIGPTGEVGSRG 1116 Query 1251 AASSATNGGSGGAGGTGGA-GGTGGAGGDGVGGAGGGNGGHGGDAGDGGNGANGNNRSSG 1309 G GA GT GA G G G DG G G G H G G Sbjct 1117 PPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRG-HQGQPG-------------- 1161 Query 1310 SFLAAGGTGGAAGDGGQGGQ----------GGAGGGAGGQGGAGGAGGTGGNGGNITGGT 1359 G G G+ G G+ G G G QG G G G G G Sbjct 1162 ----PSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEGYKGH---VGV 1214 Query 1360 AGTAGAAGNGGAAGKGGAGGQGGTGGGTGGQGGAGGDGGAGGTGGDRTVGGGTVPAGSGG 1419 G GA G G G+ G G+ G G G +G G G G +G G G Sbjct 1215 PGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGK----------PGIPG 1264 Query 1420 QGGNAGGGGAGGQGGADGGSGGDGGDAGTGGNGGNGGNRNSGNGTGGAGGNG-GGANGGA 1478 G G G G GADG SG + G G G G G R GG G G GA G Sbjct 1265 LQGLLGPKGIQGYHGADGISG-NPGKIGPPGKQGLPGIR------GGPGRTGLAGAPGPP 1317 Query 1479 GSAGGSGGGTGGNGGAGGDAGDAGNGGNGNGTGNGGNGGNGGIAGMGGNGGAGTGSGNGG 1538 G G SG G+ G G G+ G G GI G G+ GA G Sbjct 1318 GVKGSSG--LPGSPGIQGPKGEQGLPGQP------------GIQGKRGHRGAQ------G 1357 Query 1539 NGGSGGNGGNAGMGGNSGTGSGDGGAGGNGGAAGTGGTGGDGGLTGT----GGTGGSGGT 1594 + G G+ G G G G G G G G G GD G+ G G G G T Sbjct 1358 DQGPCGDPGLKGQPGEYGVQ----GLTGFQGFPGPKGPEGDAGIVGISGPKGPIGHRGNT 1413 Query 1595 GGDGGNGGNGADNTANMTAQAGGDGGNGGDGGFGGGAGAGGGGLTAGANGTGGQGG 1650 G G G G G G G+ GF G TG QG Sbjct 1414 GPLGREGIIGP----------TGRTGPRGEKGFRGE--------------TGPQGP 1445 Lambda K H a alpha 0.303 0.141 0.436 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 136413130467 Database: GCF_000001405.40_GRCh38.p14_protein.faa Posted date: Apr 24, 2023 10:59 AM Number of letters in database: 94,334,868 Number of sequences in database: 136,193 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40